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Creators/Authors contains: "Walker, Donald"

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  1. Shifts in agricultural land use over the past 200 years have led to a loss of nearly 50% of existing wetlands in the USA, and agricultural activities contribute up to 65% of the nutrients that reach the Mississippi River Basin, directly contributing to biological disasters such as the hypoxic Gulf of Mexico “Dead” Zone. Federal efforts to construct and restore wetland habitats have been employed to mitigate the detrimental effects of eutrophication, with an emphasis on the restoration of ecosystem services such as nutrient cycling and retention. Soil microbial assemblages drive biogeochemical cycles and offer a unique and sensitive framework for the accurate evaluation, restoration, and management of ecosystem services. The purpose of this study was to elucidate patterns of soil bacteria within and among wetlands by developing diversity profiles from high-throughput sequencing data, link functional gene copy number of nitrogen cycling genes to measured nutrient flux rates collected from flow-through incubation cores, and predict nutrient flux using microbial assemblage composition. Soil microbial assemblages showed fine-scale turnover in soil cores collected across the topsoil horizon (0–5 cm; top vs bottom partitions) and were structured by restoration practices on the easements (tree planting, shallow water, remnant forest). Connections between soil assemblage composition, functional gene copy number, and nutrient flux rates show the potential for soil bacterial assemblages to be used as bioindicators for nutrient cycling on the landscape. In addition, the predictive accuracy of flux rates was improved when implementing deep learning models that paired connected samples across time. 
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    Free, publicly-accessible full text available December 1, 2026
  2. Free, publicly-accessible full text available December 1, 2026
  3. Ice wedges, which are ubiquitous in permafrost areas, play a significant role in the evolution of permafrost landscapes, influencing the topography and hydrology of these regions. In this paper, we combine a detailed multi-generational, interdisciplinary, and international literature review along with our own field experiences to explore the development of low-centered ice-wedge polygons and their orthogonal networks. Low-centered polygons, a type of ice-wedge polygonal ground characterized by elevated rims and lowered wet central basins, are critical indicators of permafrost conditions. The formation of these features has been subject to numerous inconsistencies and debates since their initial description in the 1800s. The development of elevated rims is attributed to different processes, such as soil bulging due to ice-wedge growth, differential frost heave, and the accumulation of vegetation and peat. The transition of low-centered polygons to flat-centered, driven by processes like peat accumulation, aggradational ice formation, and frost heave in polygon centers, has been generally overlooked. Low-centered polygons occur in deltas, on floodplains, and in drained-lake basins. There, they are often arranged in orthogonal networks that comprise a complex system. The prevailing explanation of their formation does not match with several field studies that practically remain unnoticed or ignored. By analyzing controversial subjects, such as the degradational or aggradational nature of low-centered polygons and the formation of orthogonal ice-wedge networks, this paper aims to clarify misconceptions and present a cohesive overview of lowland terrain ice-wedge dynamics. The findings emphasize the critical role of ice wedges in shaping Arctic permafrost landscapes and their vulnerability to ongoing climatic and landscape changes. 
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    Free, publicly-accessible full text available July 1, 2026
  4. Chen, Jing M (Ed.)
    The Arctic is warming faster than anywhere else on Earth, placing tundra ecosystems at the forefront of global climate change. Plant biomass is a fundamental ecosystem attribute that is sensitive to changes in climate, closely tied to ecological function, and crucial for constraining ecosystem carbon dynamics. However, the amount, functional composition, and distribution of plant biomass are only coarsely quantified across the Arctic. Therefore, we developed the first moderate resolution (30 m) maps of live aboveground plant biomass (g m− 2) and woody plant dominance (%) for the Arctic tundra biome, including the mountainous Oro Arctic. We modeled biomass for the year 2020 using a new synthesis dataset of field biomass harvest measurements, Landsat satellite seasonal synthetic composites, ancillary geospatial data, and machine learning models. Additionally, we quantified pixel-wise uncertainty in biomass predictions using Monte Carlo simulations and validated the models using a robust, spatially blocked and nested cross-validation procedure. Observed plant and woody plant biomass values ranged from 0 to ~6000 g m− 2 (mean ≈350 g m− 2), while predicted values ranged from 0 to ~4000 g m− 2 (mean ≈275 g m− 2), resulting in model validation root-mean-squared-error (RMSE) ≈400 g m− 2 and R2 ≈ 0.6. Our maps not only capture large-scale patterns of plant biomass and woody plant dominance across the Arctic that are linked to climatic variation (e.g., thawing degree days), but also illustrate how fine-scale patterns are shaped by local surface hydrology, topography, and past disturbance. By providing data on plant biomass across Arctic tundra ecosystems at the highest resolution to date, our maps can significantly advance research and inform decision-making on topics ranging from Arctic vegetation monitoring and wildlife conservation to carbon accounting and land surface modeling 
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    Free, publicly-accessible full text available June 1, 2026
  5. McMahon, Katherine (Ed.)
    This work significantly advances our understanding of biodiversity and microbial interactions in herptile microbiomes, the role that fungi play as a structural and functional members of herptile gut microbiomes, and the chemical functions that structure microbiome phenotypes. We also provide an important observational system of how the gut microbiome represents a unique environment that selects for novel metabolic functions through horizontal gene transfer between fungi and bacteria. Such studies are needed to better understand the complexity of gut microbiomes in nature and will inform conservation strategies for threatened species of herpetofauna. 
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  6. Increased industrial development in the Arctic has led to a rapid expansion of infrastructure in the region. Localized impacts of infrastructure on snow distribution, road dust, and snowmelt timing and duration feeds back into the coupled Arctic system causing a series of cascading effects that remain poorly understood. We quantify spatial and temporal patterns of snow-off dates in the Prudhoe Bay Oilfield, Alaska, using Sentinel-2 data. We derive the Normalized Difference Snow Index to quantify snow persistence in 2019–2020. The Normalized Difference Vegetation Index and Normalized Difference Water Index were used to show linkages of vegetation and surface hydrology, in relationship to patterns of snowmelt. Newly available infrastructure data were used to analyze snowmelt patterns in relation infrastructure. Results show a relationship between snowmelt and distance to infrastructure varying by use and traffic load, and orientation relative to the prevailing wind direction (up to 1 month difference in snow-free dates). Post-snowmelt surface water area showed a strong negative correlation (up to −0.927) with distance to infrastructure. Results from field observations indicate an impact of infrastructure on winter near-surface ground temperature and snow depth. This study highlights the impact of infrastructure on a large area beyond the direct human footprint and the interconnectedness between snow-off timing, vegetation, surface hydrology, and near-surface ground temperatures. 
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  7. Land-based transport corridors and related infrastructure are increasingly extending into and across the Arctic in support of resource development and population growth, causing large-scale cumulative changes to northern socio-ecological systems. These changes include the increased mobility of people, goods and resources, and environmental impacts on landscapes and ecosystems as the human footprint reaches remote, unindustrialized regions. Arctic climate change is also generating new challenges for the construction and maintenance of these transport systems, requiring adaptive engineering solutions as well as community resilience. In this review article, we consider the complex entanglements between humans, the environment, and land transportation infrastructure in the North and illustrate these interrelations by way of seven case studies: the Baikal–Amur Mainline, Bovanenkovo Railway, Alaska–Canada Highway, Inuvik–Tuktoyatuk Highway, Alaska Railroad, Hudson Bay Railway, and proposed railways on Baffin Island, Canada. As new infrastructure is built and anticipated across the circumpolar North, there is an urgent need for an integrated socio-ecological approach to impact assessment. This would include full consideration of Indigenous knowledge and concerns, collaboration with local communities and user groups in assessment, planning and monitoring, and evaluation of alternative engineering designs to contend with the impacts of climate change in the decades ahead. 
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  8. Abstract Plant biomass is a fundamental ecosystem attribute that is sensitive to rapid climatic changes occurring in the Arctic. Nevertheless, measuring plant biomass in the Arctic is logistically challenging and resource intensive. Lack of accessible field data hinders efforts to understand the amount, composition, distribution, and changes in plant biomass in these northern ecosystems. Here, we presentThe Arctic plant aboveground biomass synthesis dataset, which includes field measurements of lichen, bryophyte, herb, shrub, and/or tree aboveground biomass (g m−2) on 2,327 sample plots from 636 field sites in seven countries. We created the synthesis dataset by assembling and harmonizing 32 individual datasets. Aboveground biomass was primarily quantified by harvesting sample plots during mid- to late-summer, though tree and often tall shrub biomass were quantified using surveys and allometric models. Each biomass measurement is associated with metadata including sample date, location, method, data source, and other information. This unique dataset can be leveraged to monitor, map, and model plant biomass across the rapidly warming Arctic. 
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    Free, publicly-accessible full text available December 1, 2025
  9. Abstract. Studies in recent decades have shown strong evidence of physical and biological changes in the Arctic tundra, largely in response to rapid rates of warming. Given the important implications of these changes for ecosystem services, hydrology, surface energy balance, carbon budgets, and climate feedbacks, research on the trends and patterns of these changes is becoming increasingly important and can help better constrain estimates of local, regional, and global impacts as well as inform mitigation and adaptation strategies. Despite this great need, scientific understanding of tundra ecology and change remains limited, largely due to the inaccessibility of this region and less intensive studies compared to other terrestrial biomes. A synthesis of existing datasets from past field studies can make field data more accessible and open up possibilities for collaborative research as well as for investigating and informing future studies. Here, we synthesize field datasets of vegetation and active-layer properties from the Alaskan tundra, one of the most well-studied tundra regions. Given the potentially increasing intensive fire regimes in the tundra, fire history and severity attributes have been added to data points where available. The resulting database is a resource that future investigators can employ to analyze spatial and temporal patterns in soil, vegetation, and fire disturbance-related environmental variables across the Alaskan tundra. This database, titled the Synthesized Alaskan Tundra Field Database (SATFiD), can be accessed at the Oak Ridge National Laboratory Distributed Active Archive Center (ORNL DAAC) for Biogeochemical Dynamics (Chen et al., 2023: https://doi.org/10.3334/ORNLDAAC/2177). 
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  10. Environmental impact assessments for new Arctic infrastructure do not adequately consider the likely long-term cumulative effects of climate change and infrastructure to landforms and vegetation in areas with ice-rich permafrost, due in part to lack of long-term environmental studies that monitor changes after the infrastructure is built. This case study examines long-term (1949–2020) climate- and road-related changes in a network of ice-wedge polygons, Prudhoe Bay Oilfield, Alaska. We studied four trajectories of change along a heavily traveled road and a relatively remote site. During 20 years prior to the oilfield development, the climate and landscapes changed very little. During 50 years after development, climate-related changes included increased numbers of thermokarst ponds, changes to ice-wedge-polygon morphology, snow distribution, thaw depths, dominant vegetation types, and shrub abundance. Road dust strongly affected plant-community structure and composition, particularly small forbs, mosses, and lichens. Flooding increased permafrost degradation, polygon center-trough elevation contrasts, and vegetation productivity. It was not possible to isolate infrastructure impacts from climate impacts, but the combined datasets provide unique insights into the rate and extent of ecological disturbances associated with infrastructure-affected landscapes under decades of climate warming. We conclude with recommendations for future cumulative impact assessments in areas with ice-rich permafrost. 
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